format

Author: chriselrod

src/systems/abstractsystem.jl

@@ -187,11 +187,14 @@ function SymbolicIndexingInterface.is_variable(sys::AbstractSystem, sym)
     if unwrap(sym) isa Int    # [x, 1] coerces 1 to a Num
         return unwrap(sym) in 1:length(unknown_states(sys))
     end
-    return any(isequal(sym), unknown_states(sys)) || hasname(sym) && is_variable(sys, getname(sym))
+    return any(isequal(sym), unknown_states(sys)) ||
+           hasname(sym) && is_variable(sys, getname(sym))
 end
 
 function SymbolicIndexingInterface.is_variable(sys::AbstractSystem, sym::Symbol)
-    return any(isequal(sym), getname.(unknown_states(sys))) || count('₊', string(sym)) == 1 && count(isequal(sym), Symbol.(sys.name, :₊, getname.(unknown_states(sys)))) == 1
+    return any(isequal(sym), getname.(unknown_states(sys))) ||
+           count('₊', string(sym)) == 1 &&
+           count(isequal(sym), Symbol.(sys.name, :₊, getname.(unknown_states(sys)))) == 1
 end
 
 function SymbolicIndexingInterface.variable_index(sys::AbstractSystem, sym)
@@ -224,12 +227,14 @@ function SymbolicIndexingInterface.is_parameter(sys::AbstractSystem, sym)
         return unwrap(sym) in 1:length(parameters(sys))
     end
 
-    return any(isequal(sym), parameters(sys)) || hasname(sym) && is_parameter(sys, getname(sym))
+    return any(isequal(sym), parameters(sys)) ||
+           hasname(sym) && is_parameter(sys, getname(sym))
 end
 
 function SymbolicIndexingInterface.is_parameter(sys::AbstractSystem, sym::Symbol)
     return any(isequal(sym), getname.(parameters(sys))) ||
-        count('₊', string(sym)) == 1 && count(isequal(sym), Symbol.(sys.name, :₊, getname.(parameters(sys)))) == 1
+           count('₊', string(sym)) == 1 &&
+           count(isequal(sym), Symbol.(sys.name, :₊, getname.(parameters(sys)))) == 1
 end
 
 function SymbolicIndexingInterface.parameter_index(sys::AbstractSystem, sym)
@@ -270,7 +275,8 @@ function SymbolicIndexingInterface.independent_variable_symbols(sys::AbstractSys
 end
 
 function SymbolicIndexingInterface.is_observed(sys::AbstractSystem, sym)
-    return !is_variable(sys, sym) && !is_parameter(sys, sym) && !is_independent_variable(sys, sym) && symbolic_type(sym) != NotSymbolic()
+    return !is_variable(sys, sym) && !is_parameter(sys, sym) &&
+           !is_independent_variable(sys, sym) && symbolic_type(sym) != NotSymbolic()
 end
 
 SymbolicIndexingInterface.is_time_dependent(::AbstractTimeDependentSystem) = true

src/systems/jumps/jumpsystem.jl

@@ -491,7 +491,7 @@ function (ratemap::JumpSysMajParamMapper{
         U,
         V,
         W,
-    })(params) where {U <: AbstractArray,
+})(params) where {U <: AbstractArray,
         V <: AbstractArray, W}
     updateparams!(ratemap, params)
     [convert(W, value(substitute(paramexpr, ratemap.subdict)))

src/systems/nonlinear/initializesystem.jl

@@ -52,4 +52,4 @@ function initializesystem(sys::ODESystem; name = nameof(sys), kwargs...)
         kwargs...)
 
     return sys_nl
-end
+end

src/variables.jl

@@ -463,4 +463,4 @@ function get_default_or_guess(x)
     else
         return getguess(x)
     end
-end
+end

test/nonlinearsystem.jl

@@ -237,7 +237,7 @@ end
 @testset "Initialization System" begin
     # Define the Lotka Volterra system which begins at steady state
     @parameters t
-    pars = @parameters a=1.5 b=1.0 c=3.0 d=1.0 dx_ss = 1e-5
+    pars = @parameters a=1.5 b=1.0 c=3.0 d=1.0 dx_ss=1e-5
 
     vars = @variables begin
         dx(t),
@@ -274,4 +274,4 @@ end
 
     # Confirm for all the states of the simplified system
     @test all(.≈(sol[states(sys_simple)], [1e-5 / 1.5, 0]; atol = 1e-8))
-end
+end