File Format: Pathways

The pathways file specifies the genes that belong to each pathway in a pathway group. This file should contain the following columns:

• Pathway: The name of the pathway.
• Gene Symbol: The gene ID.
• Core: Whether this gene is a "core" pathway gene. Either TRUE or FALSE.
• Gene Description: A description of the gene.
• Location: The gene's chromosome location.

An example of this file is as follows:

Pathway	Gene Symbol	Core	Gene Description	Location
Base Excision Repair (BER)	ALKBH1	FALSE	alkB homolog 1, histone H2A dioxygenase	14q24.3
Base Excision Repair (BER)	APEX1	TRUE	apurinic/apyrimidinic endodeoxyribonuclease 1	14q11.2
Fanconi Anemia (FA)	APITD1	FALSE	apoptosis-inducing, TAF9-like domain 1	1p36.22
Fanconi Anemia (FA)	BARD1	FALSE	BRCA1 associated RING domain 1	2q35
Fanconi Anemia (FA)	BLM	FALSE	Bloom syndrome, RecQ helicase-like	15q26.1
...	...	...	...	...